Package: fdacluster 0.3.0.9000

fdacluster: Joint Clustering and Alignment of Functional Data

Implementations of the k-means, hierarchical agglomerative and DBSCAN clustering methods for functional data which allows for jointly aligning and clustering curves. It supports functional data defined on one-dimensional domains but possibly evaluating in multivariate codomains. It supports functional data defined in arrays but also via the 'fd' and 'funData' classes for functional data defined in the 'fda' and 'funData' packages respectively. It currently supports shift, dilation and affine warping functions for functional data defined on the real line and uses the SRSF framework to handle boundary-preserving warping for functional data defined on a specific interval. Main reference for the k-means algorithm: Sangalli L.M., Secchi P., Vantini S., Vitelli V. (2010) "k-mean alignment for curve clustering" <doi:10.1016/j.csda.2009.12.008>. Main reference for the SRSF framework: Tucker, J. D., Wu, W., & Srivastava, A. (2013) "Generative models for functional data using phase and amplitude separation" <doi:10.1016/j.csda.2012.12.001>.

Authors:Aymeric Stamm [aut, cre], Laura Sangalli [ctb], Piercesare Secchi [ctb], Simone Vantini [ctb], Valeria Vitelli [ctb], Alessandro Zito [ctb]

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Bug tracker:https://github.com/astamm/fdacluster/issues

On CRAN:

9 exports 5 stars 1.65 score 94 dependencies 1 dependents 24 scripts 314 downloads

Last updated 7 months agofrom:0cecb99115. Checks:OK: 9. Indexed: yes.

Exports:as_capscompare_capsdiagnostic_plotfdadbscanfdadistfdahclustfdakmeansis_capslp

Dependencies:askpassbase64encbslibcachemcliclustercodacodetoolscolorspacecpp11crosstalkcurldata.tabledbscandigestdoParalleldotCall64dplyrevaluatefansifarverfastmapfdasrvffieldsfontawesomeforcatsforeachfsfurrrfuturegenericsggplot2globalsgluegtablehighrhtmltoolshtmlwidgetshttrisobanditeratorsjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclelistenvlpSolvemagrittrmapsMASSMatrixmemoisemgcvmimemunsellmvtnormnlmenloptropensslparallellypillarpkgconfigplotlyprogressrpromisespurrrR6rappdirsRColorBrewerRcppRcppArmadillorlangrmarkdownsassscalesspamstringistringrsystibbletidyrtidyselecttinytextoleranceutf8vctrsviridisLitewithrxfunyaml