Package: roahd 1.4.3.9000

roahd: Robust Analysis of High Dimensional Data

A collection of methods for the robust analysis of univariate and multivariate functional data, possibly in high-dimensional cases, and hence with attention to computational efficiency and simplicity of use. See the R Journal publication of Ieva et al. (2019) <doi:10.32614/RJ-2019-032> for an in-depth presentation of the 'roahd' package. See Aleman-Gomez et al. (2021) <arxiv:2103.08874> for details about the concept of depthgram.

Authors:Nicholas Tarabelloni [aut], Ana Arribas-Gil [aut], Francesca Ieva [aut], Anna Maria Paganoni [aut], Juan Romo [aut], Francesco Palma [ctb], Aymeric Stamm [ctb, cre], Antonio Elias-Fernandez [ctb]

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roahd.pdf |roahd.html✨
roahd/json (API)
NEWS

# Install 'roahd' in R:
install.packages('roahd', repos = c('https://astamm.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/astamm/roahd/issues

Datasets:
  • mfD_LBBB - ECG trace of subjects suffering from Left-Bundle-Branch-Block
  • mfD_healthy - ECG trace of healthy subjects

On CRAN:

47 exports 2 stars 1.66 score 72 dependencies 2 dependents 1 mentions 141 scripts 352 downloads

Last updated 3 years agofrom:613a776ad0. Checks:OK: 3 NOTE: 4. Indexed: yes.

TargetResultDate
Doc / VignettesOKSep 07 2024
R-4.5-winNOTESep 07 2024
R-4.5-linuxNOTESep 07 2024
R-4.4-winNOTESep 07 2024
R-4.4-macNOTESep 07 2024
R-4.3-winOKSep 07 2024
R-4.3-macOKSep 07 2024

Exports:%>%append_fDataappend_mfDataarea_orderedarea_under_curveas.mfDataBCIntervalSpearmanBCIntervalSpearmanMultivariateBDBD_relativeBTestSpearmancor_kendallcor_spearmancor_spearman_accuracycov_fundepthgramEIexp_cov_functionfbplotfDatafDColorPalettegenerate_gauss_fdatagenerate_gauss_mfdataHIHRDmax_orderedmaximaMBDMBD_relativemedian_fDatamedian_mfDataMEImfDataMHIMHRDminimamultiBDmultiMBDmultiMEImultiMHImultivariate_outliergramoutliergramset_alphatoListOfValuestoRowMatrixFormunfoldwarp

Dependencies:askpassbase64encbslibcachemclicolorspacecpp11crosstalkcurldata.tableDEoptimRdigestdplyrevaluatefansifarverfastmapfontawesomefsgenericsggplot2gluegtablehighrhtmltoolshtmlwidgetshttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclemagrittrMASSMatrixmemoisemgcvmimemunsellnlmeopensslpillarpkgconfigplotlypromisespurrrR6rappdirsRColorBrewerRcpprlangrmarkdownrobustbasesassscalesstringistringrsystibbletidyrtidyselecttinytexutf8vctrsviridisLitewithrxfunyaml

roahd

Nicholas Tarabelloni

Rendered fromroahd.Rmdusingknitr::rmarkdown_notangleon Sep 07 2024.

Last update: 2022-01-31
Started: 2022-01-31

Readme and manuals

Help Manual

Help pageTopics
Append two compatible univariate functional datasetsappend_fData
Append two compatible multivariate functional datasetsappend_mfData
Area-under-curve order relation between univariate functional dataarea_ordered
Area under curve of elements of univariate functional dataarea_under_curve
Converting object to 'mfData' classas.mfData as.mfData.list
Bootstrap Confidence Interval on Spearman's Correlation Coefficient between Univariate Functional DatasetsBCIntervalSpearman
Bootstrap Confidence Interval on Spearman's Correlation Coefficient of a Multivariate Functional DatasetBCIntervalSpearmanMultivariate
Band Depth for univariate functional dataBD BD.default BD.fData
Relative Band Depth of functions in a univariate functional datasetBD_relative BD_relative.default BD_relative.fData
Bootstrap Hypothesis Test on Spearman Correlation Coefficients for Multivariate Functional DataBTestSpearman
Kendall's tau correlation coefficient for bivariate functional datacor_kendall
Spearman's correlation coefficient for multivariate functional datacor_spearman
Bootstrap Spearman's correlation coefficient for multivariate functional datacor_spearman_accuracy
Covariance function for functional datacov_fun cov_fun.fData cov_fun.mfData
Depthgram for univariate and multivariate functional data setsdepthgram depthgram.default depthgram.fData depthgram.mfData
Epigraph Index of univariate functional datasetEI EI.default EI.fData
Exponential covariance function over a gridexp_cov_function
Functional boxplot of univariate and multivariate functional datafbplot fbplot.fData fbplot.mfData
'S3' Class for univariate functional datasets.fData
A set of fancy color to plot functional datasetsfDColorPalette
Generation of gaussian univariate functional datagenerate_gauss_fdata
Generation of gaussian multivariate functional datagenerate_gauss_mfdata
Hypograph Index of univariate functional datasetHI HI.default HI.fData
Half-Region Depth for univariate functional dataHRD HRD.default HRD.fData
Maximum order relation between univariate functional datamax_ordered
Maxima of a univariate functional datasetmaxima
Modified Band Depth for univariate functional dataMBD MBD.default MBD.fData
Relative Modified Band Depth of functions in a univariate functional datasetMBD_relative MBD_relative.default MBD_relative.fData
Cross-sectional mean of of a fData object.mean.fData
Cross-sectional mean of of a mfData object.mean.mfData
Median of a univariate functional datasetmedian_fData
Median of a multivariate functional datasetmedian_mfData
Modified Epigraph Index of univariate functional datasetMEI MEI.default MEI.fData
ECG trace of healthy subjectsmfD_healthy
ECG trace of subjects suffering from Left-Bundle-Branch-Block (LBBB)mfD_LBBB
'S3' class for multivariate functional datasetsmfData
Modified Hypograph Index of univariate functional datasetMHI MHI.default MHI.fData
Modified Half-Region Depth for univariate functional dataMHRD MHRD.default MHRD.fData
Minima of a univariate functional datasetminima
(Modified) Band Depth for multivariate functional datamultiBD multiBD.default multiBD.mfData multiMBD multiMBD.default multiMBD.mfData
Modified Epigraph Index for multivariate functional datamultiMEI multiMEI.default multiMEI.mfData
Modified Hypograph Index for multivariate functional datamultiMHI multiMHI.default multiMHI.mfData
Outliergram for multivariate functional datasetsmultivariate_outliergram
Outliergram for univariate functional data setsoutliergram
Specialized method to plot 'Cov' objectsplot.Cov
Specialized method to plot 'depthgram' objectsplot.depthgram
Specialized method to plot 'fData' objectsplot.fData
Specialized method to plot 'mfData' objectsplot.mfData
Operator '+' and '-' for 'fData' objects+.fData -.fData plus-.fData
Function to setup alpha value for a set of colorsset_alpha
Operator 'sub-.fData' to subset 'fData' objectssub-.fData [.fData
Operator 'sub-.mfData' to subset 'mfData' objectssub-.mfData [.mfData
Operator '*' and '/' for 'fData' objects*.fData /.fData times-.fData
Manipulation of 'mfData' list of valuestoListOfValues
Conversion of vector/array/matrix to row-matrix formtoRowMatrixForm
Unfolding a univariate functional datasetunfold
Warp elements of a univariate functional datasetwarp